Genome sequence and annotation of Digitalis purpurea

Pucker, Boas; Friedhoff, Ronja; Horz, Jakob; Wolff, Katharina

doi:10.24355/dbbs.084-202311130950-0

Research Data Fri Feb 16 2024 CC BY 4.0

Published

Genome sequence and annotation of Digitalis purpurea

Pucker, Boas ; Friedhoff, Ronja ; Horz, Jakob ; Wolff, Katharina

The genome of a red flowering Digitalis purpurea plant was sequenced with nanopore long reads. The genome sequence was assembled with NextDenovo2 and the gene models were predicted by BRAKER3. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences.

Category

Is referenced by:

Genome sequence of the medicinal and ornamental plant Digitalis purpurea reveals the molecular basis of flower color variation [Article / Chapter]. https://doi.org/10.1101/2024.02.14.580303

Date Created:

01.01.2022 - 01.10.2023

Date Issued:

16.02.2024

DOI:

10.24355/dbbs.084-202311130950-0

Language:

English

Type of Resource:

Text

Keywords:

Digitalis purpurea

Typ

Schlagwort
genome sequence

Typ

Schlagwort

DDC:

572 Biochemie

Hosting institution:

02 - Life Sciences

Type:: Text Gene expression data of plant species
Research Object:: Organism Digitalis purpurea
Data Origin:: Experiment and Measurements The genome of a red flowering Digitalis purpurea plant was sequenced with nanopore long reads (R9.4.1 flow cells, MinION) based on high molecular weight DNA extracted with a previously established protocol (https://dx.doi.org/10.17504/protocols.io.bcvyiw7w).
Description of Data Processing:: The genome sequence was assembled with NextDenovo2 and the gene models were predicted by BRAKER3. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences.